AustralieFrV1, Main, Exploration, bibRecord, 006E12

MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data

Identifieur interne : 006E12 ( Main/Exploration ); précédent : 006E11; suivant : 006E13

MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data

Auteurs : Hiren J. Joshi [États-Unis] ; Matthias Hirsch-Hoffmann [Suisse] ; Katja Baerenfaller [Suisse] ; Wilhelm Gruissem [Suisse] ; Sacha Baginsky [Allemagne] ; Robert Schmidt [Allemagne] ; Waltraud X. Schulze [Allemagne] ; QI SUN [États-Unis] ; Klaas J. Van Wijk [États-Unis] ; Volker Egelhofer [Autriche] ; Stefanie Wienkoop [Autriche] ; Wolfram Weckwerth [Autriche] ; Christophe Bruley [France] ; Norbert Rolland [France] ; Tetsuro Toyoda [Japon] ; Hirofumi Nakagami [Japon] ; Alexandra M. Jones [Royaume-Uni] ; Steven P. Briggs [États-Unis] ; Ian Castleden [Australie] ; Sandra K. Tanz [Australie] ; A. Harvey Millar [Australie] ; Joshua L. Heazlewood [États-Unis]

Source :

Plant physiology : (Bethesda) [ 0032-0889 ] ; 2011.

RBID : Pascal:11-0079922

Descripteurs français

Pascal (Inist)
- Agrégation, Visualisation, Protéomique, Arabidopsis thaliana, Physiologie végétale.

English descriptors

KwdEn :
- Aggregation, Arabidopsis thaliana, Plant physiology, Proteomics, Visualization.

Abstract

Proteomics has become a critical tool in the functional understanding of plant processes at the molecular level. Proteomics-based studies have also contributed to the ever-expanding array of data in modern biology, with many generating Web portals and online resources that contain incrementally expanding and updated information. Many of these resources reflect specialist research areas with significant and novel information that is not currently captured by centralized repositories. The Arabidopsis (Arabidopsis thaliana) community is well served by a number of online proteomics resources that hold an abundance of functional information. These sites can be difficult to locate among a multitude of online resources. Furthermore, they can be difficult to navigate in order to identify specific features of interest without significant technical knowledge. Recently, members of the Arabidopsis proteomics community involved in developing many of these resources decided to develop a summary aggregation portal that is capable of retrieving proteomics data from a series of online resources on the fly. The Web portal is known as the MASCP Gator and can be accessed at the following address: http://gator.masc-proteomics.org/. Significantly, proteomics data displayed at this site retrieve information from the data repositories upon each request. This means that information is always up to date and displays the latest data sets. The site also provides hyperlinks back to the source information hosted at each of the curated databases to facilitate more in-depth analysis of the primary data.

Affiliations:

Links toward previous steps (curation, corpus...)

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Le document en format XML

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SCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data</title>
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<s3>CHE</s3>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>Suisse</country>
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</affiliation>
</author>
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<country>Allemagne</country>
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</author>
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</author>
<author><name sortKey="Schulze, Waltraud X" sort="Schulze, Waltraud X" uniqKey="Schulze W" first="Waltraud X." last="Schulze">Waltraud X. Schulze</name>
<affiliation wicri:level="3"><inist:fA14 i1="04"><s1>Max-Planck Institute for Molecular Plant Physiology</s1>
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</placeName>
</affiliation>
</author>
<author><name sortKey="Qi Sun" sort="Qi Sun" uniqKey="Qi Sun" last="Qi Sun">QI SUN</name>
<affiliation wicri:level="4"><inist:fA14 i1="05"><s1>Department of Plant Biology, Cornell University</s1>
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<sZ>8 aut.</sZ>
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</inist:fA14>
<country>États-Unis</country>
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</placeName>
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</affiliation>
</author>
<author><name sortKey="Van Wijk, Klaas J" sort="Van Wijk, Klaas J" uniqKey="Van Wijk K" first="Klaas J." last="Van Wijk">Klaas J. Van Wijk</name>
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<sZ>8 aut.</sZ>
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<country>États-Unis</country>
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</affiliation>
</author>
<author><name sortKey="Egelhofer, Volker" sort="Egelhofer, Volker" uniqKey="Egelhofer V" first="Volker" last="Egelhofer">Volker Egelhofer</name>
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</affiliation>
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<author><name sortKey="Wienkoop, Stefanie" sort="Wienkoop, Stefanie" uniqKey="Wienkoop S" first="Stefanie" last="Wienkoop">Stefanie Wienkoop</name>
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<sZ>10 aut.</sZ>
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<country>Autriche</country>
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<author><name sortKey="Weckwerth, Wolfram" sort="Weckwerth, Wolfram" uniqKey="Weckwerth W" first="Wolfram" last="Weckwerth">Wolfram Weckwerth</name>
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</inist:fA14>
<country>Autriche</country>
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</author>
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</inist:fA14>
<country>France</country>
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</inist:fA14>
<country>France</country>
<wicri:noRegion>38000 Grenoble</wicri:noRegion>
<placeName><settlement type="city">Grenoble</settlement>
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<sZ>13 aut.</sZ>
<sZ>14 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>38000 Grenoble</wicri:noRegion>
<placeName><settlement type="city">Grenoble</settlement>
<region type="region" nuts="2">Auvergne-Rhône-Alpes</region>
<region type="old region" nuts="2">Rhône-Alpes</region>
<settlement type="city">Grenoble</settlement>
</placeName>
<orgName type="university">Université Joseph Fourier</orgName>
</affiliation>
</author>
<author><name sortKey="Rolland, Norbert" sort="Rolland, Norbert" uniqKey="Rolland N" first="Norbert" last="Rolland">Norbert Rolland</name>
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<s3>FRA</s3>
<sZ>13 aut.</sZ>
<sZ>14 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>38000 Grenoble</wicri:noRegion>
<placeName><settlement type="city">Grenoble</settlement>
<region type="region" nuts="2">Auvergne-Rhône-Alpes</region>
<region type="old region" nuts="2">Rhône-Alpes</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><inist:fA14 i1="09"><s1>Université Joseph Fourier</s1>
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<s3>FRA</s3>
<sZ>13 aut.</sZ>
<sZ>14 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>38000 Grenoble</wicri:noRegion>
<placeName><settlement type="city">Grenoble</settlement>
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<settlement type="city">Grenoble</settlement>
</placeName>
<orgName type="university">Université Joseph Fourier</orgName>
</affiliation>
<affiliation wicri:level="1"><inist:fA14 i1="10"><s1>CNRS, Laboratoire de Physiologie Cellulaire Végétale, UMR5168</s1>
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<sZ>14 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>38000 Grenoble</wicri:noRegion>
<placeName><settlement type="city">Grenoble</settlement>
<region type="region" nuts="2">Auvergne-Rhône-Alpes</region>
<region type="old region" nuts="2">Rhône-Alpes</region>
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<affiliation wicri:level="1"><inist:fA14 i1="11"><s1>INRA, UMR1200</s1>
<s2>38000 Grenoble</s2>
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<sZ>14 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>38000 Grenoble</wicri:noRegion>
<placeName><settlement type="city">Grenoble</settlement>
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<author><name sortKey="Toyoda, Tetsuro" sort="Toyoda, Tetsuro" uniqKey="Toyoda T" first="Tetsuro" last="Toyoda">Tetsuro Toyoda</name>
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<sZ>15 aut.</sZ>
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</affiliation>
</author>
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<sZ>15 aut.</sZ>
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</inist:fA14>
<country>Japon</country>
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<s3>GBR</s3>
<sZ>17 aut.</sZ>
</inist:fA14>
<country>Royaume-Uni</country>
<wicri:noRegion>Norwich NR4 7UH</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Briggs, Steven P" sort="Briggs, Steven P" uniqKey="Briggs S" first="Steven P." last="Briggs">Steven P. Briggs</name>
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<s3>USA</s3>
<sZ>18 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
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<author><name sortKey="Castleden, Ian" sort="Castleden, Ian" uniqKey="Castleden I" first="Ian" last="Castleden">Ian Castleden</name>
<affiliation wicri:level="1"><inist:fA14 i1="15"><s1>Centre of Excellence for Computational Systems Biology, University of Western Australia</s1>
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<s3>AUS</s3>
<sZ>19 aut.</sZ>
</inist:fA14>
<country>Australie</country>
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<affiliation wicri:level="1"><inist:fA14 i1="16"><s1>Australian Research Council Centre of Excellence in Plant Energy Biology and Centre for Comparative Analysis of Biomolecular Networks, University of Western Australia</s1>
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<s3>AUS</s3>
<sZ>19 aut.</sZ>
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</inist:fA14>
<country>Australie</country>
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<author><name sortKey="Tanz, Sandra K" sort="Tanz, Sandra K" uniqKey="Tanz S" first="Sandra K." last="Tanz">Sandra K. Tanz</name>
<affiliation wicri:level="1"><inist:fA14 i1="16"><s1>Australian Research Council Centre of Excellence in Plant Energy Biology and Centre for Comparative Analysis of Biomolecular Networks, University of Western Australia</s1>
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<sZ>19 aut.</sZ>
<sZ>20 aut.</sZ>
<sZ>21 aut.</sZ>
</inist:fA14>
<country>Australie</country>
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</affiliation>
</author>
<author><name sortKey="Harvey Millar, A" sort="Harvey Millar, A" uniqKey="Harvey Millar A" first="A." last="Harvey Millar">A. Harvey Millar</name>
<affiliation wicri:level="1"><inist:fA14 i1="16"><s1>Australian Research Council Centre of Excellence in Plant Energy Biology and Centre for Comparative Analysis of Biomolecular Networks, University of Western Australia</s1>
<s2>Crawley 6009, Western Australia</s2>
<s3>AUS</s3>
<sZ>19 aut.</sZ>
<sZ>20 aut.</sZ>
<sZ>21 aut.</sZ>
</inist:fA14>
<country>Australie</country>
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</author>
<author><name sortKey="Heazlewood, Joshua L" sort="Heazlewood, Joshua L" uniqKey="Heazlewood J" first="Joshua L." last="Heazlewood">Joshua L. Heazlewood</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Joint BioEnergy Institute, Lawrence Berkeley National Laboratory</s1>
<s2>Berkeley, California 94720</s2>
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<country>États-Unis</country>
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<series><title level="j" type="main">Plant physiology : (Bethesda)</title>
<title level="j" type="abbreviated">Plant physiol. : (Bethesda)</title>
<idno type="ISSN">0032-0889</idno>
<imprint><date when="2011">2011</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt><title level="j" type="main">Plant physiology : (Bethesda)</title>
<title level="j" type="abbreviated">Plant physiol. : (Bethesda)</title>
<idno type="ISSN">0032-0889</idno>
</seriesStmt>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Aggregation</term>
<term>Arabidopsis thaliana</term>
<term>Plant physiology</term>
<term>Proteomics</term>
<term>Visualization</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr"><term>Agrégation</term>
<term>Visualisation</term>
<term>Protéomique</term>
<term>Arabidopsis thaliana</term>
<term>Physiologie végétale</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Proteomics has become a critical tool in the functional understanding of plant processes at the molecular level. Proteomics-based studies have also contributed to the ever-expanding array of data in modern biology, with many generating Web portals and online resources that contain incrementally expanding and updated information. Many of these resources reflect specialist research areas with significant and novel information that is not currently captured by centralized repositories. The Arabidopsis (Arabidopsis thaliana) community is well served by a number of online proteomics resources that hold an abundance of functional information. These sites can be difficult to locate among a multitude of online resources. Furthermore, they can be difficult to navigate in order to identify specific features of interest without significant technical knowledge. Recently, members of the Arabidopsis proteomics community involved in developing many of these resources decided to develop a summary aggregation portal that is capable of retrieving proteomics data from a series of online resources on the fly. The Web portal is known as the MASCP Gator and can be accessed at the following address: http://gator.masc-proteomics.org/. Significantly, proteomics data displayed at this site retrieve information from the data repositories upon each request. This means that information is always up to date and displays the latest data sets. The site also provides hyperlinks back to the source information hosted at each of the curated databases to facilitate more in-depth analysis of the primary data.</div>
</front>
</TEI>
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<name sortKey="Castleden, Ian" sort="Castleden, Ian" uniqKey="Castleden I" first="Ian" last="Castleden">Ian Castleden</name>
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   |texte=   MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data
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This area was generated with Dilib version V0.6.33.
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	Serveur d'exploration sur les relations entre la France et l'Australie
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration sur les relations entre la France et l'Australie

MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data

MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data

Source :

Descripteurs français

English descriptors

Abstract

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Le document en format XML

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